Package: vaccine 1.2.1

vaccine: Statistical Tools for Immune Correlates Analysis of Vaccine Clinical Trial Data

Various semiparametric and nonparametric statistical tools for immune correlates analysis of vaccine clinical trial data. This includes calculation of summary statistics and estimation of risk, vaccine efficacy, controlled effects (controlled risk and controlled vaccine efficacy), and mediation effects (natural direct effect, natural indirect effect, proportion mediated). See Gilbert P, Fong Y, Kenny A, and Carone, M (2022) <doi:10.1093/biostatistics/kxac024> and Fay MP and Follmann DA (2023) <doi:10.48550/arXiv.2208.06465>.

Authors:Avi Kenny [aut, cre]

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Bug tracker:https://github.com/avi-kenny/vaccine/issues

On CRAN:

12 exports 4 stars 2.15 score 92 dependencies 11 scripts 200 downloads

Last updated 2 months agofrom:8dcdf33108. Checks:OK: 7. Indexed: yes.

Exports:as_tablediagnosticsest_ceest_medest_overallload_dataparams_ce_coxparams_ce_npparams_med_npplot_cesummary_statstrim

Dependencies:abindbackportsbitopsbootbroomcarcarDatacaToolsclassclicobscodetoolscolorspacecorrplotcowplotcpp11cvAUCdata.tableDerivdoBydplyre1071fansifarverfdrtoolforeachgamgenericsggplot2ggpubrggrepelggsciggsignifgluegplotsgridExtragtablegtoolsIsoisobanditeratorsKernSmoothlabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrmunsellnlmenloptrnnetnnlsnumDerivpbkrtestpillarpkgconfigpolynomproxypurrrquantregR6rangerRColorBrewerRcppRcppEigenrlangROCRRsolnprstatixscalessimestSparseMstringistringrSuperLearnersurvivalsurvMLtibbletidyrtidyselecttruncnormutf8vctrsviridisLitewithr